HNH endonuclease bacterial toxin Colicin E7
Factor for inversion stimulation Fis
Periplasmaic endonuclease Vvn
Other Enzymes
Tudor-SN
Pnpase
Colicin
1CEI
STRUCTURE DETERMINATION OF THE COLICIN E7 IMMUNITY PROTEIN (IMME7) THAT BINDS SPECIFICALLY TO THE DNASE-TYPE COLICIN E7 AND INHIBITS ITS BACTERIOCIDAL ACTIVITY
--> Characteristics
Release Date: 12-Mar-1997 Exp. Method: X Ray Diffraction
Resolution: 1.80 Å
Classification
Antibacterial Protein
Compound
Polymer: 1 Molecule: COLICIN E7 IMMUNITY PROTEIN Chains: A
Authors
Chak, K.-F., Safo, M.K., Ku, W.-Y., Hsieh, S.-Y., Yuan, H.S.*
1UNK
STRUCTURE OF COLICIN E7 IMMUNITY PROTEIN
Characteristics
Release Date: 07-Jan-1998 Exp. Method: X Ray Diffraction
Immunity Protein
Polymer: 1 Molecule: COLICIN E7 Chains: A,B,C,D
Ko, T.-P., Hsieh, S.-Y., Ku, W.-Y., Tseng, M.-Y., Chak, K.-F., Yuan, H.S.*
7CEI
THE ENDONUCLEASE DOMAIN OF COLICIN E7 IN COMPLEX WITH ITS INHIBITOR IM7 PROTEIN
Release Date: 17-Sep-1999 Exp. Method: X Ray Diffraction
Resolution: 2.30 Å
Immune System
Polymer: 1 Molecule: PROTEIN (COLICIN E7 IMMUNITY PROTEIN) Chains: A Polymer: 2 Molecule: PROTEIN (COLICIN E7 IMMUNITY PROTEIN) Fragment: ENDONUCLEASE DOMAIN Chains: B
Ko, T.P., Liao, C.C., Ku, W.Y., Chak, K.F., Yuan, H.S.*
1M08
Crystal structure of the unbound nuclease domain of ColE7
Release Date: 11-Dec-2002 Exp. Method: X Ray Diffraction
Resolution: 2.10 Å
Hydrolase
Polymer: 1 Molecule: Colicin E7 Fragment: Nuclease Domain Chains: A,B EC no.: 3.1.-.-
Cheng, Y.S., Hsia, K.C., Doudeva, L.G., Chak, K.F., Yuan, H.S.*
1MZ8
CRYSTAL STRUCTURES OF THE NUCLEASE DOMAIN OF COLE7/IM7 IN COMPLEX WITH A PHOSPHATE ION AND A ZINC ION
Release Date: 23-Dec-2002 Exp. Method: X Ray Diffraction
Resolution: 2.00 Å
Toxin Hydrolase/protein Binding
Polymer: 1 Molecule: Colicin E7 immunity protein Chains: A,C Polymer: 2 Molecule: Colicin E7 Fragment: nuclease domain Chains: B,D EC no.: 3.1.-.-
Sui, M.J., Tsai, L.C., Hsia, K.C., Doudeva, L.G., Ku, W.Y., Han, G.W., Yuan, H.S.*
1PT3
Crystal structures of nuclease-ColE7 complexed with octamer DNA
Release Date: 30-Mar-2004 Exp. Method: X Ray Diffraction
Resolution: 2.50 Å
Hydrolase/DNA
Polymer: 1 Molecule: 5'-GCGATCGC-3' Chains: C,D,E,F,G,H Polymer: 2 Molecule: Colicin E7 Fragment: residues 449-576 Chains: A,B EC no.: 3.1.-.-
Hsia, K.C., Chak, K.F., Cheng, Y.S., Ku, W.Y., Yuan, H.S.*
1ZNS
Crystal structure of N-ColE7/12-bp DNA/Zn complex
Release Date: 14-Mar-2006 Exp. Method: X Ray Diffraction
Polymer: 1 Molecule: 5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3' Chains: B,C Polymer: 2 Molecule: Colicin E7 Fragment: nuclease domain Mutation: H545E Chains: A EC no.: 3.1.-.-
Doudeva, L.G., Huang, H., Hsia, K.C., Shi, Z., Li, C.L., Shen, Y., Yuan, H.S.*
1ZNV
How a His-metal finger endonuclease ColE7 binds and cleaves DNA with a transition metal ion cofactor
Hydrolase/protein Binding
Polymer: 1 Molecule: Colicin E7 immunity protein Chains: A,C Polymer: 2 Molecule: Colicin E7 Fragment: Nuclease domain Mutation: H545E Chains: B,D EC no.: 3.1.-.-
Doudeva, L.G., Huang, H., Hsia, K.C., Shi, Z., Li, C.L., Shen, Y., Yuan, H.S.
2AXC
Crystal structure of ColE7 translocation domain
Resolution: 1.70 Å
Polymer: 1 Molecule: Colicin E7 Fragment: N-terminal Translocation domain Chains: A EC no.: 3.1.-.-
Cheng, Y.S., Shi, Z., Doudeva, L.G., Yang, W.Z., Chak, K.F., Yuan, H.S.
2IVH
CRYSTAL STRUCTURE OF THE NUCLEASE DOMAIN OF COLE7 (H545Q MUTANT) IN COMPLEX WITH AN 18-BP DUPLEX DNA
Release Date: 02-Jan-2007 Exp. Method: X Ray Diffraction
Resolution: 2.80 Å
Polymer: 1 Molecule: 5'-D(*GP*GP*AP*AP*TP*TP*CP*GP*AP*TP *CP*GP*AP*AP*TP*TP*CP*C)-3' Chains: B,C Polymer: 2 Molecule: COLCIN-E7 Fragment: NUCLEASE DOMAIN, RESIDUES 449-576 Mutation: YES Chains: A EC no.: 3.1.-.-
Wang, Y.T., Yang, W.J., Li, C.L., Doudeva, L.G., Yuan, H.S.
2JAZ
CRYSTAL STRUCTURE OF THE MUTANT N560D OF THE NUCLEASE DOMAIN OF COLE7 IN COMPLEX WITH IM7
Release Date: 03-Apr-2007 Exp. Method: X Ray Diffraction
Resolution: 2.03 Å
Hydrolase/inhibitor Complex
Polymer: 1 Molecule: COLICIN E7 IMMUNITY PROTEIN Chains: A,C EC no.: 3.1.-.- Polymer: 2 Molecule: COLICIN E7 Fragment: NUCLEASE DOMAIN, RESIDUES 446-576 Mutation: YES Chains: B,D EC no.: 3.1.-.-
Huang, H., Yuan, H.S.*
2JB0
CRYSTAL STRUCTURE OF THE MUTANT H573A OF THE NUCLEASE DOMAIN OF COLE7 IN COMPLEX WITH IM7
Resolution: 1.91 Å
Polymer: 1 Molecule: COLICIN E7 IMMUNITY PROTEIN Chains: A EC no.: 3.1.-.- Polymer: 2 Molecule: COLICIN E7 Fragment: NUCLEASE DOMAIN, RESIDUES 446-576 Mutation: YES Chains: B EC no.: 3.1.-.-
2JBG
CRYSTAL STRUCTURE OF THE MUTANT N560A OF THE NUCLEASE DOMAIN OF COLE7 IN COMPLEX WITH IM7
Resolution: 2.20 Å
Polymer: 1 Molecule: COLICIN-E7 IMMUNITY PROTEIN Chains: A,C EC no.: 3.1.-.- Polymer: 2 Molecule: COLICIN E7 Fragment: NUCLEASE DOMAIN, RESIDUES 446-576 Mutation: YES Chains: B,D EC no.: 3.1.-.-
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Fis
3FIS
THE MOLECULAR STRUCTURE OF WILD-TYPE AND A MUTANT FIS PROTEIN: RELATIONSHIP BETWEEN MUTATIONAL CHANGES AND RECOMBINATIONAL ENHANCER FUNCTION OR DNA BINDING
Release Date: 31-Oct-1993 Exp. Method: X Ray Diffraction
DNA Binding Protein
Polymer: 1 Molecule: FACTOR FOR INVERSION STIMULATION (FIS) Chains: A,B
Yuan, H.S.*, Finkel, S.E., Feng, J-A., Johnson, R.C., Dickerson, R.E.
4FIS
Yuan, H.S.*, Finkel, S.E., Feng, J.-A., Johnson, R.C., Dickerson, R.E.
1F36
THE CRYSTAL STRUCTURE OF FIS MUTANT K36E REVEALS THAT THE TRANSACTIVATION REGION OF THE FIS PROTEIN CONTAINS EXTENDED MOBILE BETA-HAIRPIN ARMS
Release Date: 24-Dec-1997 Exp. Method: X Ray Diffraction
Resolution: 2.65 Å
Transactivation Region
Polymer: 1 Molecule: FIS Mutation: K36E Chains: A,B
Safo, M.K., Yuan, H.S.*
1ETK
THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT Q68A
Release Date: 11-Oct-2000 Exp. Method: X Ray Diffraction
Transcription Activator
Polymer: 1 Molecule: FACTOR FOR INVERSION STIMULATION Mutation: Q68A Chains: A,B
Cheng, Y.S., Yang, W.Z., Johnson, R.C., Yuan, H.S.*
1ETO
THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT R71L
Resolution: 1.90 Å
Polymer: 1 Molecule: FACTOR FOR INVERSION STIMULATION Mutation: R71L Chains: A,B
1ETQ
THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT R71Y
Polymer: 1 Molecule: FACTOR FOR INVERSION STIMULATION Mutation: R71Y Chains: A,B,C,D
1ETV
THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT G72A
Polymer: 1 Molecule: FACTOR FOR INVERSION STIMULATION Mutation: G72A Chains: A,B
1ETW
THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT G72D
Polymer: 1 Molecule: FACTOR FOR INVERSION STIMULATION Mutation: G72D Chains: A,B
1ETX
THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT Q74A
Polymer: 1 Molecule: FACTOR FOR INVERSION STIMULATION Mutation: Q74A Chains: A,B
1ETY
THE CRYSTAL STRUCTURE OF E. COLI WILD-TYPE FIS
Polymer: 1 Molecule: FACTOR FOR INVERSION STIMULATION Chains: A,B
top Vvn
1OUO
Crystal structure of the periplasmic endonuclease Vvn
Release Date: 05-Aug-2003 Exp. Method: X Ray Diffraction
Polymer: 1 Molecule: Nuclease Fragment: residue 19-228 Chains: A EC no.: 3.1.-.-
Yuan, H.S.*, Li, C.L.
1OUP
Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA
Polymer: 1 Molecule: 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' Chains: C,D,F Polymer: 2 Molecule: 5'-D(*GP*CP*GP*AP*TP*C)-3' Chains: E Polymer: 3 Molecule: 5'-D(P*GP*C)-3' Chains: G Polymer: 4 Molecule: Nuclease Fragment: residues 19-231 Mutation: H80A Chains: A,B EC no.: 3.1.-.-
Yuan, H.S.*, Li, C.-L.
2IVK
CRYSTAL STRUCTURE OF THE PERIPLASMIC ENDONUCLEASE Vvn COMPLEXED WITH A 16-BP DNA
Resolution: 2.90 Å
Polymer: 1 Molecule: 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*T)-3' Chains: E,G Polymer: 2 Molecule: 5'-D(*AP*AP*TP*TP*CP*GP*AP*TP*CP*GP *AP*AP*TP*TP*C)-3' Chains: F,H Polymer: 3 Molecule: 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*TP*C)-3' Chains: I,J Polymer: 4 Molecule: ENDONUCLEASE I Mutation: YES Chains: A,B,C,D EC no.: 3.1.-.-
Wang, Y.T., Yang, W.J., Li, C.L., Doudeva, L.G., Yuan, H.S.*
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1MVE
Crystal structure of a natural circularly-permutated jellyroll protein: 1,3-1,4-beta-D-glucanase from Fibrobacter succinogenes
Release Date: 15-Jul-2003 Exp. Method: X Ray Diffraction
Polymer: 1 Molecule: Truncated 1,3-1,4-beta-D-glucanase Fragment: Residues 1-243 Chains: A EC no.: 3.2.1.73
Tsai, L.-C., Shyur, L.-F., Lee, S.-H., Lin, S.-S., Yuan, H.S.*
3TAT
TYROSINE AMINOTRANSFERASE FROM E. COLI
Release Date: 12-Aug-1999 Exp. Method: X Ray Diffraction
Resolution: 3.50 Å
Aminotransferase
Polymer: 1 Molecule: TYROSINE AMINOTRANSFERASE Chains: A,B,C,D,E,F EC no.: 2.6.1.57 Other Details: CONTAINS A PYRIDOXAL 5'-PHOSPHATE (PLP) COVALENTLY BOUND TO LYS 258
Ko, T.P., Yang, W.Z., Wu, S.P., Tsai, H., Yuan, H.S.*
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Crystal structure of a truncated human Tudor-SN
Release Date: 26-Aug-2008 Exp. Method: X Ray Diffraction
Polymer: 1 Molecule: Staphylococcal nuclease domain-containing protein 1 Fragment: TSN-64 (SN3, SN4, Tudor, SN5 domains) Chains: A EC no.: 3.1.31.1
Li, C.L
